Computational optimisation for mixOmics, the R package dedicated to 'omics' data integration
FranÇois Bartolo  1@  , Sébastien Déjean  2, *@  , Benoit Gautier  3  , Ignacio González  2@  , Florian Rohart, Kim-Anh Lê Cao  4, *@  
1 : Institut de Mathématiques de Toulouse  (IMT)  -  Site web
PRES Université de Toulouse, CNRS : UMR5219
UPS IMT, F-31062 Toulouse Cedex 9, France INSA, F-31077 Toulouse, France UT1, F-31042 Toulouse, France UT2, F-31058 Toulouse, France -  France
2 : Institut de Mathématiques, Université de Toulouse et CNRS
Centre National de la Recherche Scientifique
UMR 5219, F-31062 Toulouse -  France
3 : The University of Queensland [Brisbane]  -  Site web
Brisbane St Lucia, QLD 4072 -  Australie
4 : Queensland Facility for Advanced Bioinformatics, University of Queensland
4072 St Lucia, QLD -  Australie
* : Auteur correspondant

We have recently implemented novel methodologies in mixOmics to integrate several 'omics data sets simulaneously. These novel developments require intensive computations which can be eased through efficient optimisation and memory management.



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